uganda lab gis - esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. ·...

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Laboratory Landscapes: GIS for Laboratory System Strengthening in the BD-PEPFAR Labs for Life Program

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Page 1: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

Laboratory Landscapes:GIS for Laboratory System Strengthening in the BD-PEPFAR Labs for Life Program

Page 2: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference
Page 3: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

What’s the problem that lab GIS tries to solve?

Page 4: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

High disease burdens

Page 5: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

High poverty and inequality

Page 6: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

Growing populations

Page 7: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

Large but inefficient and under-funded systems

Page 8: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

Uneven distribution of diseases, people and systems.

Page 9: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

Lots of laboratories*

* Depending on the definition of “laboratory”

Page 10: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

Lots of diagnostic technology*

*Much of which is past its useful life and frequently broken

Page 11: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

But fragmented information

Page 12: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

Limited strategic views

Page 13: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

Difficulty responding quickly and accurately

Page 14: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

In other words, we need an integrated picture

Page 15: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

What’s happening in lab systems overall?

Page 16: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

Plan, measure and adjust

Page 17: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

In near-real time

Page 18: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

And in multiple dimensions

Page 19: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

Test results Health records

Repair and Maintenance

Training and Human Resources

Quality Indicators

Material Inventory

Page 20: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

UUganda LLab GIS

Thanks to Moses Jolobaand Uganda’s National TB Reference Lab, who produced all the work below for Uganda.

Page 21: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

KKey Areas of Lab GIS Innovation in Uganda

• Geocoding public health laboratories to understand national network

• Tracking spatial distribution of quality improvement activities

• Tracking specimen referral system for network enhancements

• Tracking MDR-TB cases for rapid intervention

Page 22: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference
Page 23: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

TTracking Specimen Referral

Legendlakes

Health CentersNumber of samples sent

0

1 - 3

4 - 8

9 - 20

21 - 250

Districts 2010

Population densities 20100 - 50

51 - 100

101 - 250

251 - 500

501 - 800

801 - 8224

Page 24: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

TTracking MDR-TB

Page 25: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

EEthiopia LLab GIS

Thanks to Gonfa Ayana and the Ethiopian Health and Nutrition Research Institute (EHNRI)

Page 26: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

Partnership:Public – Private – Non-Profit - Academic

Page 27: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

Direct Relief – EHNRI – BD Lab GIS TeamFebruary, 2012

Page 28: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

Where are the labs?

Where is the equipment?

How are results distributed?

How are results transported?

What is most in need of repair?

Where are supplies most needed?

Which facilities are in greatest need?

Page 29: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

GIS

Lab Info Systems

Specimen Referral

Baseline Surveys

Equipment Database

Quality Assessment

Data

HMIS

System-wide Data Integration

Page 30: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

KKey Challenges

• Ubiquitous paper forms

• Regional semi-autonomy

• Sporadic communications network coverage

• Vendor competition among information systems

• Low-level data science / GIS training

Page 31: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

PProvisional Responses

• Use existing LIS-installations and track referrals through regional systems

• Use flexible query system rather than direct system integration

• Use combination of outreach and SMS reporting

• Lowest common denominator data integration

• Build training resources at national and regional levels

Page 32: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference

PPreliminary Ethiopia Maps: Lab Equipment / Malaria Survey / Measles Cases

How are essential healthcare resources distributed?

Page 33: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference
Page 34: Uganda Lab GIS - Esriproceedings.esri.com/library/userconf/proc13/papers/447... · 2021. 3. 13. · Uganda Lab GIS Author: Andrew Schroeder Subject: 2013 Esri International User Conference