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. . . . . . Recent Advances and Trends in Applied Algebraic Topology Mikael Vejdemo-Johansson School of Computer Science University of St Andrews Scotland July 8, 2012 M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 1 / 15

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Page 1: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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Recent Advances and Trends inApplied Algebraic Topology

Mikael Vejdemo-Johansson

School of Computer ScienceUniversity of St Andrews

Scotland

July 8, 2012

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 1 / 15

Page 2: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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History and trends in applied algebraic topology

Outline

...1 History and trends in applied algebraic topology

...2 Showcasing the next generation

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 2 / 15

Page 3: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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History and trends in applied algebraic topology

e History of the eld

1845 Kirchhoff formulates “homological” circuit laws.1895 Analysis Situs by Henri Poincaré de nes homology.

1925-28 Noether, Mayer & Vietoris categorify homology.1993 Size theory1996 Incremental Betti numbers2002 Persistent homology2005 Algebraic persistent homology2007 Stability theorems2007 Extended persistence2007 Multi-dimensional persistence2008 Zig-zag persistence2009 Algebraic stability2009 Persistent cohomology2010 Well groups2011 Dualities (absolute/relative (co)homology share barcodes)2012 Categori cation of persistence

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 3 / 15

Page 4: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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History and trends in applied algebraic topology

Current trends

Formalization: k[t]-modules. Order representations. Categorical diagrams.

Enlargement: more topological techniques are introduced into the eld.

Speed up: faster computation means larger problems; parallelization,simplifying pre-processing.

More application elds: information ow networks, ethology,phylogenetics, sports, ...

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 4 / 15

Page 5: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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Showcasing the next generation

Outline

...1 History and trends in applied algebraic topology

...2 Showcasing the next generation

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 5 / 15

Page 6: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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Showcasing the next generation

Paweł Dłotko

.Cohomology in electromagnetic modeling.

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Based on reformulation of Maxwell’s laws in a discrete setting.

Local version of laws (Ampere, Faraday,...) formulated on primal/dualcell complex by using (co)boundary operator.

We impose global version of the laws by adding cohomologicalinformation.

We show that rst cohomology basis of the insulating region is themissing d.o.f. that make the computations consistent.

We provide efficient software to compute cohomology groups &generators.

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 6 / 15

Page 7: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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Showcasing the next generation

Paweł Dłotko.Homology for regular CW-complexes...

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Usually (co)homology of simplicial or cubical complexes is consideredin applied science.

We have introduced algorithm providing (co)homology of any regularCW complex.

Gain – when the data do not t the simplicial or cubical structure.

Input: list of faces of every cell. Output: (co)homology. Incidences ofcells computed by the algorithm.

Example: homology of non–regular cubical grid which efficientlyapproximates homology of nodal domains of functions.

Technique used in statistical simulation of spinodal decomposition inalloys, providing orders of magnitude better performance.

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 7 / 15

Page 8: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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Showcasing the next generation

Bei Wang, University of UtahLocal homology measures behavior very close to a point. Everythingoutside a small circle collapses to a single point.

n-dimensional manifolds turn into n-spheres; we can use local homology tomeasure dimensionality.

More importantly, singular or branching behavior corresponds to wedges ofspheres.

x (a)

w

x

(b)

(c) (d)

xx

x

w

x

(e) (f)

(h) (i)(g)

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 8 / 15

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Showcasing the next generation

Bei Wang, University of Utah.Results..

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Can classify strata in strati ed spaces; turn up inter alia when analyzingconformation spaces in robotics or in chemistry.

Can classify branching points in self-intersecting time series data.

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 9 / 15

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Showcasing the next generation

Vidit Nanda, Rutgers

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M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 10 / 15

Page 11: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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Showcasing the next generation

Vidit Nanda, Rutgers

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M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 10 / 15

Page 12: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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Showcasing the next generation

Vidit Nanda, Rutgers

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M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 10 / 15

Page 13: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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Showcasing the next generation

Vidit Nanda, Rutgers

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M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 10 / 15

Page 14: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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Showcasing the next generation

Vidit Nanda, Rutgers

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M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 10 / 15

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Showcasing the next generation

Vidit Nanda, Rutgers

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M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 10 / 15

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Showcasing the next generation

Vidit Nanda, Rutgers

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M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 10 / 15

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Showcasing the next generation

Vidit Nanda, Rutgers

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M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 10 / 15

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Showcasing the next generation

Vidit Nanda, Rutgers

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M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 10 / 15

Page 19: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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Showcasing the next generation

Vidit Nanda, Rutgers

.Main result..

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Discrete Morse theory is compatible with persistent homology. A lteredcomplex contracts to a ltered complex. This speeds up computations inapplied algebraic topology.

.Implementation available

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......Part of the Perseus project.Available at http://www.math.rutgers.edu/~vidit/perseus.html

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 11 / 15

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Ulrich Bauer, IST Austria

Uses discrete morse theory for topological simpli cation.

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 12 / 15

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Showcasing the next generation

Elizabeth Munch, Duke

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 13 / 15

Page 22: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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Showcasing the next generation

Elizabeth Munch, Duke

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 13 / 15

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Showcasing the next generation

Elizabeth Munch, Duke

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 13 / 15

Page 24: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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Showcasing the next generation

Elizabeth Munch, Duke

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 13 / 15

Page 25: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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Showcasing the next generation

Elizabeth Munch, Duke

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 13 / 15

Page 26: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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Showcasing the next generation

Elizabeth Munch, Duke

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 13 / 15

Page 27: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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Elizabeth Munch, Duke

.Results..

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Suppose sensors fail with some probability. Then:

Computing the probability of failure of the H2 criterion is #P-hard.If imminent failure can be detected by a monitoring system, analgorithm is provided.

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 14 / 15

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Showcasing the next generation

Jennifer Gamble, NCSU

A sensor network that variesthrough time, where sensorsare mobile or transient, posesadditional challenges.

Zig-zag homology providesthe tools needed to trackcoverage holes across severalsnapshots.

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 15 / 15

Page 29: Recent Advances and Trends in Applied Algebraic Topology...History and trends in applied algebraic topology Outline 1. History and trends in applied algebraic topology 2. Showcasing

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Hungry for more?.Survey papers..

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Topology and Data by Gunnar CarlssonBarcodes: the persistent topology of data by Robert Ghrist

.Topic conferences..

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ATMCS – biennial conference on applied and computational algebraictopologyACM SoCG – computational geometry conference with strongcomputational topology sessions

.Aggregating websites..

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http://comptop.stanford.edu – Homepage of Gunnar Carlsson’sworkgroup. Contains conference and preprint aggregation.http://www.appliedtopology.org – yet to be launched; coordinatingwebpage for the community, centered around ATMCS.

M Vejdemo-Johansson (St Andrews) Trends in applied algebraic topology July 8, 2012 16 / 15