plateforme de calcul pour les sciences du vivant medical images platform arnaud fessy
TRANSCRIPT
Plateforme de Calcul pour les Sciences du Vivant
http://clrpcsv.in2p3.fr
Medical Images Platform
Arnaud Fessy
Plateforme de stockage d'images médicales 2
Plateforme de Calcul pour les Sciences du Vivant
MIP functionalities
Upload
Visualization
Anonymization
Dicom metadataextraction
Metadata registrationIn AMGA
Operational functionalities :
Quickly upload images on a Dicom serverMultithreaded upload
Visualize one or more Dicom images
Functionalities : confidentiality, color inverse, zoom, multi
frames, etc…
Remove the confidential data from Dicom images
Extract the medical data from the Dicom images
Backup the Dicom data under text and xml formats
Parse the medical data and to store them in AMGAMake possible to integrate the Grid aspect in the Web platform
Plateforme de stockage d'images médicales 3
Plateforme de Calcul pour les Sciences du Vivant
MIP functionalities to come
GridFtp upload
Visualization: Management of a broader panel of Dicom standards
Security: authentication by certificate + encryption + hydra
Job submission functionality with automatic failed jobs resubmission
Images & Jobs results research with an Amga search engine
UI integration
??
Plateforme de stockage d'images médicales 4
Plateforme de Calcul pour les Sciences du Vivant
Upload
Plateforme de stockage d'images médicales 5
Plateforme de Calcul pour les Sciences du Vivant
Visualization
Plateforme de stockage d'images médicales 6
Plateforme de Calcul pour les Sciences du Vivant
Anonymization & metadata extraction
Plateforme de stockage d'images médicales 7
Plateforme de Calcul pour les Sciences du Vivant
Amga image registration (principle)
Images selection
Dicom fields selection
Check in the image
of the presence of
the selected Dicom fields
Amga connection
Directory and attributes
creation
Dicom metadata
extraction
Check authorization
+
assignment of the rights
is Dicom
warning if Dicom
selected fields missing
if Amga server
reachable
ok
ok
Imagesregistration
Plateforme de stockage d'images médicales 8
Plateforme de Calcul pour les Sciences du Vivant
Amga registration (under development)
Dicom fields selection Checking Dicom fields selected
Plateforme de stockage d'images médicales 9
Plateforme de Calcul pour les Sciences du Vivant
Global architecture
Imager PACS MIP
SE
PUSH imag
e
GridFTP
LFC
Hospital
Doctor / Physician
Copyimage
AMGA
CE
GridIm
age
regi
stra
tion
Met
adat
a re
gist
ratio
n
Copyresults
Internet
Image treatment jo
b
Req
uest
s on
res
ults
Applet